Page 172 - Perdih, Andrej, Katja Lakota, Alja Prah. 2020. Strukture bioloških molekul. Univerzitetni učbenik z recenzijo in navodila za vaje. Koper: Založba Univerze na Primorskem.
P. 172
andrej perdih, katja lakota, alja prah
I. BIOLOŠKE MAKROMOLEKULE
• Voet D, Voet JG. Biochemistry, 4th Edition, John Wiley & Sons, Inc., 2010.
• Berg JM, Tymoczko JT, Stryer L. Biochemistry, 6th Edition, New York: W H Freeman;
2006.
• Alberts et al. Molecular Biology of the Cell, Sixth Edition, W. W. Norton & Company,
2014.
II. DOLOČEVANJE 3D STRUKTURE BIOLOŠKIH MOLEKUL S KRISTALOGRAFIJO
• Rhodes G. Crystallography Made Crystal Clear: A Guide for Users of Macromolecular
Models 3rd Edition, Academic Press, 2006.
III. DOLOČEVANJE 3D STRUKTURE BIOLOŠKIH MOLEKUL Z NMR SPEKTROSKOPIJO
• Cavanagh J, Skelton NJ, Fairbrother WJ, Rance M, Palmer AG Protein NMR
Spectroscopy: Principles and Practice. 2th Edition, Academic Press, 2010.
IV. MOLEKULSKO MODELIRANJE
• Leach, A. R. Molecular Modelling: Principles and Applications, 2th Edition, Pearson
2001.
V. NAPOVEDOVANJE 3D STRUKTURE PROTEINOV Z RAČUNSKIMI METODAMI
•
• Cavasotto CN, Phatak SS. Homology modeling in drug discovery: current trends and
applications. Drug Discov Today. 2009:676-683.
• Friesner RA, Abel R, Goldfeld DA, Miller EB, Murrett CS. Computational methods for
high resolution prediction and refinement of protein structures. Curr Opin Struct Biol.
2013:177-84.
Schmidt T, Bergner A, Schwede T. Modelling three-dimensional protein structures for
applications in drug design. Drug Discov Today. 2014:890-897.
VI. UPORABA PROTEINSKIH STRUKTUR PRI NAČRTOVANJU BIOLOŠKO AKTIVNIH MOLEKUL
•
• Schneider G, Baringhaus K-H, Kubinyi H. Molecular Design: Concepts and Applications,
• Wiley-VCH Verlag, Weinheim 2008.
Perdih A, Kotnik M, Oblak M et al. Uporaba računalniške kemije pri načrtovanju in
• iskanju novih spojin vodnic. Farm. vestn. 2010; 61: 195-202.
Jukič M, Perdih A, Šolmajer T. Integriran pristop iskanja spojin vodnic naravnega izvora
z uporabo eksperimentalnih in računalniško podprtih metod. Farm. Vestn. 2012; 63:
54–63.
Valjavec K, Perdih A. Razvoj zdravilnih učinkovin in metode računalniško podprtega
načrtovanja Proteus, 2019, 81, 350-358.
172
I. BIOLOŠKE MAKROMOLEKULE
• Voet D, Voet JG. Biochemistry, 4th Edition, John Wiley & Sons, Inc., 2010.
• Berg JM, Tymoczko JT, Stryer L. Biochemistry, 6th Edition, New York: W H Freeman;
2006.
• Alberts et al. Molecular Biology of the Cell, Sixth Edition, W. W. Norton & Company,
2014.
II. DOLOČEVANJE 3D STRUKTURE BIOLOŠKIH MOLEKUL S KRISTALOGRAFIJO
• Rhodes G. Crystallography Made Crystal Clear: A Guide for Users of Macromolecular
Models 3rd Edition, Academic Press, 2006.
III. DOLOČEVANJE 3D STRUKTURE BIOLOŠKIH MOLEKUL Z NMR SPEKTROSKOPIJO
• Cavanagh J, Skelton NJ, Fairbrother WJ, Rance M, Palmer AG Protein NMR
Spectroscopy: Principles and Practice. 2th Edition, Academic Press, 2010.
IV. MOLEKULSKO MODELIRANJE
• Leach, A. R. Molecular Modelling: Principles and Applications, 2th Edition, Pearson
2001.
V. NAPOVEDOVANJE 3D STRUKTURE PROTEINOV Z RAČUNSKIMI METODAMI
•
• Cavasotto CN, Phatak SS. Homology modeling in drug discovery: current trends and
applications. Drug Discov Today. 2009:676-683.
• Friesner RA, Abel R, Goldfeld DA, Miller EB, Murrett CS. Computational methods for
high resolution prediction and refinement of protein structures. Curr Opin Struct Biol.
2013:177-84.
Schmidt T, Bergner A, Schwede T. Modelling three-dimensional protein structures for
applications in drug design. Drug Discov Today. 2014:890-897.
VI. UPORABA PROTEINSKIH STRUKTUR PRI NAČRTOVANJU BIOLOŠKO AKTIVNIH MOLEKUL
•
• Schneider G, Baringhaus K-H, Kubinyi H. Molecular Design: Concepts and Applications,
• Wiley-VCH Verlag, Weinheim 2008.
Perdih A, Kotnik M, Oblak M et al. Uporaba računalniške kemije pri načrtovanju in
• iskanju novih spojin vodnic. Farm. vestn. 2010; 61: 195-202.
Jukič M, Perdih A, Šolmajer T. Integriran pristop iskanja spojin vodnic naravnega izvora
z uporabo eksperimentalnih in računalniško podprtih metod. Farm. Vestn. 2012; 63:
54–63.
Valjavec K, Perdih A. Razvoj zdravilnih učinkovin in metode računalniško podprtega
načrtovanja Proteus, 2019, 81, 350-358.
172
